Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | E5P20_23900 | Not Available | Positive | 4747770 - 4747840 | 2357.77 |
| hypothetical protein | E5P20_23905 | Not Available | Negative | 4747841 - 4747909 | 2256.66 |
| hypothetical protein | E5P20_23910 | Not Available | Negative | 4747943 - 4748134 | 7707.46 |
| type a-1 chloramphenicol o-acetyltransferase | E5P20_23915 | Not Available | Positive | 4748188 - 4748847 | 25664.5 |
| gnat family n-acetyltransferase | E5P20_23920 | Not Available | Negative | 4749048 - 4749425 | 14016.0 |
| tn3-like element tnas3 family transposase | E5P20_23925 | Not Available | Negative | 4749492 - 4752458 | 111093.0 |
| recombinase family protein | E5P20_23930 | Not Available | Negative | 4752461 - 4753021 | 21330.6 |
| duf3330 domain-containing protein | E5P20_23935 | Not Available | Negative | 4753147 - 4753497 | 12550.7 |
| mn(2+) uptake nramp transporter mnth | E5P20_23940 | Not Available | Negative | 4753625 - 4754478 | 30517.8 |
| nucleoside permease nupc | E5P20_23945 | Not Available | Positive | 4754814 - 4756016 | 43478.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





