Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | E5P20_23570 | Not Available | Negative | 4694831 - 4696396 | 59340.6 |
| alpa family transcriptional regulator | E5P20_23575 | Not Available | Negative | 4696412 - 4696660 | 9321.18 |
| hypothetical protein | E5P20_23580 | Not Available | Positive | 4696761 - 4698584 | 72240.6 |
| hypothetical protein | E5P20_23585 | Not Available | Positive | 4699706 - 4699774 | 2256.66 |
| sel1 repeat family protein | E5P20_23590 | Not Available | Negative | 4699941 - 4700630 | 25080.4 |
| formate dehydrogenase subunit alpha | E5P20_23595 | Not Available | Negative | 4700724 - 4702871 | 79228.1 |
| multidrug efflux transporter outer membrane subunit mdtp | E5P20_23600 | Not Available | Negative | 4703069 - 4704535 | 53456.3 |
| multidrug efflux transporter permease subunit mdto | E5P20_23605 | Not Available | Negative | 4704532 - 4706583 | 76155.1 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | E5P20_23610 | Not Available | Negative | 4706583 - 4707614 | 36910.3 |
| is1 family transposase | E5P20_23615 | Not Available | Negative | 4707719 - 4707829 | 4273.23 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





