Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P20_23105 | Not Available | Positive | 4611482 - 4611685 | 7143.69 |
| hypothetical protein | E5P20_23110 | Not Available | Positive | 4611840 - 4613045 | 45188.8 |
| hypothetical protein | E5P20_23115 | Not Available | Positive | 4613215 - 4613706 | 17805.5 |
| hnh endonuclease | E5P20_23120 | Not Available | Positive | 4614145 - 4614951 | 29996.6 |
| hypothetical protein | E5P20_23125 | Not Available | Positive | 4615057 - 4615476 | 15262.1 |
| hypothetical protein | E5P20_23135 | Not Available | Positive | 4616304 - 4616486 | 6522.02 |
| dna-binding protein | E5P20_23145 | Not Available | Negative | 4617000 - 4617404 | 15182.2 |
| is1 family transposase | E5P20_23150 | Not Available | Negative | 4617918 - 4617988 | 2357.77 |
| duf4049 domain-containing protein | E5P20_23155 | Not Available | Positive | 4618178 - 4619800 | 61127.8 |
| hlyd family secretion protein | E5P20_23160 | Not Available | Positive | 4620166 - 4621233 | 38830.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





