Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | E5P20_22900 | Not Available | Positive | 4585481 - 4585592 | 4299.32 |
| arsc family reductase | E5P20_22905 | Not Available | Positive | 4585817 - 4586173 | 13601.3 |
| succinyl-diaminopimelate desuccinylase | E5P20_22910 | Not Available | Positive | 4586177 - 4587304 | 41271.4 |
| ypfn family protein | E5P20_22915 | Not Available | Positive | 4587332 - 4587532 | 8071.78 |
| esterase | E5P20_22920 | Not Available | Negative | 4587642 - 4588340 | 24856.5 |
| trna cytosine(34) acetyltransferase tmca | E5P20_22925 | Not Available | Negative | 4588414 - 4590429 | 74896.7 |
| neutral zinc metallopeptidase | E5P20_22930 | Not Available | Negative | 4590444 - 4591307 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | E5P20_22935 | Not Available | Negative | 4591475 - 4592188 | 26996.5 |
| outer membrane protein assembly factor bamc | E5P20_22940 | Not Available | Negative | 4592401 - 4593435 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | E5P20_22945 | Not Available | Negative | 4593452 - 4594330 | 31271.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





