Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial chaperone ecpe | E5P20_22335 | Not Available | Negative | 4498304 - 4499014 | 26629.7 |
| fimbrial adhesin ecpd | E5P20_22340 | Not Available | Negative | 4498983 - 4500626 | 60000.2 |
| fimbrial biogenesis outer membrane usher protein | E5P20_22345 | Not Available | Negative | 4500616 - 4503141 | 91233.7 |
| hypothetical protein | E5P20_22350 | Not Available | Negative | 4503167 - 4503808 | 23503.9 |
| common pilus major fimbrillin subunit ecpa | E5P20_22355 | Not Available | Negative | 4503837 - 4504424 | 20112.5 |
| hypothetical protein | E5P20_22365 | Not Available | Positive | 4504672 - 4504741 | 2256.66 |
| is1 family transposase | E5P20_22370 | Not Available | Positive | 4504742 - 4504851 | 4160.06 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | E5P20_22380 | Not Available | Negative | 4505214 - 4506371 | 41820.4 |
| peptide antibiotic transporter sbma | E5P20_22385 | Not Available | Positive | 4506723 - 4507943 | 46496.0 |
| surface-exposed outer membrane lipoprotein yaiw | E5P20_22390 | Not Available | Positive | 4507956 - 4509050 | 40345.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





