Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid transaminase | E5P20_21960 | Not Available | Negative | 4423993 - 4425186 | 43524.2 |
| alanine racemase | E5P20_21965 | Not Available | Negative | 4425439 - 4426518 | 39155.2 |
| replicative dna helicase dnab | E5P20_21970 | Not Available | Negative | 4426571 - 4427986 | 52393.1 |
| quinone oxidoreductase | E5P20_21975 | Not Available | Positive | 4428069 - 4429052 | 35174.1 |
| envelope stress response protein pspg | E5P20_21980 | Not Available | Negative | 4429218 - 4429460 | 9054.03 |
| trna dihydrouridine(20/20a) synthase dusa | E5P20_21985 | Not Available | Negative | 4429594 - 4430631 | 38469.1 |
| duf2713 family protein | E5P20_21990 | Not Available | Negative | 4430992 - 4431984 | 37447.4 |
| zinc uptake transcriptional repressor zur | E5P20_21995 | Not Available | Positive | 4432302 - 4432817 | 19255.2 |
| csbd family protein | E5P20_22000 | Not Available | Negative | 4432859 - 4433068 | 8325.67 |
| mate family efflux transporter dinf | E5P20_22005 | Not Available | Negative | 4433184 - 4434563 | 49649.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





