Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | E5P20_01225 | Not Available | Positive | 270758 - 272107 | 51472.2 |
| hypothetical protein | E5P20_01230 | Not Available | Negative | 272157 - 272253 | 3834.38 |
| is1 family transposase | E5P20_01235 | Not Available | Negative | 272254 - 272333 | 2485.91 |
| protein yohp | E5P20_01240 | Not Available | Positive | 272479 - 272562 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | E5P20_01245 | Not Available | Negative | 272935 - 273882 | 35201.5 |
| hypothetical protein | E5P20_01250 | Not Available | Positive | 274121 - 274519 | 14579.6 |
| cidb/lrgb family autolysis modulator | E5P20_01255 | Not Available | Positive | 274516 - 275211 | 24471.1 |
| cytidine deaminase | E5P20_01260 | Not Available | Positive | 275341 - 276225 | 31541.6 |
| outer membrane permeability protein sana | E5P20_01265 | Not Available | Positive | 276375 - 277094 | 27288.5 |
| duf2542 family protein | E5P20_01270 | Not Available | Positive | 277097 - 277336 | 9264.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





