Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-sensing cyclic-di-gmp phosphodiesterase | E5P20_21910 | Not Available | Positive | 4414115 - 4416514 | 90265.6 |
| d-alanyl-d-alanine dipeptidase | E5P20_21915 | Not Available | Positive | 4416772 - 4417353 | 21214.2 |
| abc transporter substrate-binding protein | E5P20_21920 | Not Available | Positive | 4417367 - 4418917 | 57644.2 |
| abc transporter permease | E5P20_21925 | Not Available | Positive | 4418919 - 4419941 | 37347.3 |
| d,d-dipeptide abc transporter permease | E5P20_21930 | Not Available | Positive | 4419938 - 4420834 | 31972.9 |
| abc transporter atp-binding protein | E5P20_21935 | Not Available | Positive | 4420831 - 4421817 | 36102.1 |
| atp-binding cassette domain-containing protein | E5P20_21940 | Not Available | Positive | 4421810 - 4422736 | 34623.1 |
| peroxiredoxin osmc | E5P20_21945 | Not Available | Negative | 4422792 - 4423223 | 15089.0 |
| is1 family transposase | E5P20_21950 | Not Available | Positive | 4423354 - 4423424 | 2357.77 |
| is1 family transposase | E5P20_21955 | Not Available | Negative | 4423425 - 4423496 | 2357.77 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





