Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | E5P20_21525 | Not Available | Positive | 4332015 - 4332908 | 31660.0 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | E5P20_21530 | Not Available | Negative | 4333103 - 4334170 | 39436.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | E5P20_21535 | Not Available | Negative | 4334167 - 4334676 | 17767.3 |
| udp-2,3-diacylglucosamine diphosphatase | E5P20_21540 | Not Available | Negative | 4334794 - 4335516 | 26895.7 |
| peptidylprolyl isomerase b | E5P20_21545 | Not Available | Negative | 4335519 - 4336013 | 18154.5 |
| cysteine--trna ligase | E5P20_21550 | Not Available | Positive | 4336187 - 4337572 | 52186.9 |
| metal-dependent hydrolase | E5P20_21555 | Not Available | Negative | 4337608 - 4338129 | 19457.4 |
| ribosome-associated protein ybcj | E5P20_21560 | Not Available | Negative | 4338237 - 4338449 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | E5P20_21565 | Not Available | Negative | 4338451 - 4339317 | 31045.6 |
| type 1 fimbrial protein subunit fima | E5P20_21570 | Not Available | Positive | 4339788 - 4340330 | 18475.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





