Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | E5P20_21475 | Not Available | Positive | 4320594 - 4320703 | 4160.06 |
| allantoinase allb | E5P20_21480 | Not Available | Positive | 4320723 - 4322084 | 49604.4 |
| uracil/xanthine transporter | E5P20_21485 | Not Available | Positive | 4322141 - 4323442 | 47242.2 |
| glycerate 3-kinase | E5P20_21490 | Not Available | Positive | 4323464 - 4324609 | 38735.0 |
| (s)-ureidoglycine aminohydrolase | E5P20_21495 | Not Available | Negative | 4324837 - 4325622 | 28715.1 |
| allantoate amidohydrolase | E5P20_21500 | Not Available | Negative | 4325633 - 4326868 | 45658.5 |
| ureidoglycolate dehydrogenase | E5P20_21505 | Not Available | Negative | 4326890 - 4327939 | 37884.2 |
| acyl-coa synthetase fdra | E5P20_21510 | Not Available | Positive | 4328256 - 4329923 | 58744.7 |
| duf1116 domain-containing protein | E5P20_21515 | Not Available | Positive | 4329933 - 4331192 | 44951.6 |
| duf2877 domain-containing protein | E5P20_21520 | Not Available | Positive | 4331203 - 4332018 | 29731.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





