Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbi/virb10 family protein | E5P20_21060 | Not Available | Positive | 4238837 - 4239997 | 40853.6 |
| conjugal transfer protein trag | E5P20_21065 | Not Available | Positive | 4240039 - 4241034 | 36927.9 |
| phospholipase d family protein | E5P20_21070 | Not Available | Positive | 4241034 - 4241567 | 19461.2 |
| hypothetical protein | E5P20_21075 | Not Available | Negative | 4241740 - 4242366 | 23815.7 |
| conjugative relaxase | E5P20_21080 | Not Available | Negative | 4242366 - 4245602 | 120156.0 |
| duf87 domain-containing protein | E5P20_21085 | Not Available | Negative | 4245602 - 4247131 | 57766.1 |
| trak protein | E5P20_21090 | Not Available | Negative | 4247133 - 4247549 | 15333.5 |
| hypothetical protein | E5P20_21095 | Not Available | Positive | 4248139 - 4248525 | 14625.2 |
| stdb protein | E5P20_21100 | Not Available | Positive | 4248534 - 4249250 | 26364.4 |
| stbc | E5P20_21105 | Not Available | Positive | 4249252 - 4249620 | 13469.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





