Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | E5P20_20950 | Not Available | Negative | 4224793 - 4225332 | 19374.4 |
| type 1 fimbrial protein subunit fima | E5P20_20955 | Not Available | Negative | 4225397 - 4225951 | 18624.9 |
| dna cytosine methyltransferase | E5P20_20965 | Not Available | Negative | 4226554 - 4227987 | 54558.9 |
| hypothetical protein | E5P20_20975 | Not Available | Negative | 4228369 - 4228575 | 7886.58 |
| restriction endonuclease | E5P20_20980 | Not Available | Negative | 4228580 - 4229068 | 18330.2 |
| hypothetical protein | E5P20_20985 | Not Available | Negative | 4229277 - 4229588 | 11523.7 |
| incn plasmid kika protein | E5P20_20990 | Not Available | Negative | 4229624 - 4229938 | 11139.6 |
| hypothetical protein | E5P20_20995 | Not Available | Negative | 4229935 - 4230279 | 12746.2 |
| korb | E5P20_21000 | Not Available | Negative | 4230295 - 4230645 | 13199.8 |
| tral protein | E5P20_21005 | Not Available | Positive | 4230709 - 4231443 | 25835.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





