Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase nrfefg subunit nrff | E5P20_20625 | Not Available | Positive | 4169702 - 4170085 | 14516.9 |
| heme lyase nrfefg subunit nrfg | E5P20_20630 | Not Available | Positive | 4170082 - 4170678 | 22754.5 |
| glutamate/aspartate:proton symporter gltp | E5P20_20635 | Not Available | Positive | 4171020 - 4172333 | 47107.0 |
| is1 family transposase | E5P20_20640 | Not Available | Negative | 4172824 - 4172894 | 2357.77 |
| spovr family protein | E5P20_20645 | Not Available | Positive | 4173129 - 4174661 | 60817.1 |
| fatty acid metabolism transcriptional regulator fadr | E5P20_20650 | Not Available | Negative | 4174713 - 4175432 | 26970.2 |
| na(+)/h(+) antiporter nhab | E5P20_20655 | Not Available | Positive | 4175653 - 4177194 | 56747.8 |
| disulfide bond formation protein dsbb | E5P20_20660 | Not Available | Positive | 4177340 - 4177870 | 20090.2 |
| translesion error-prone dna polymerase v subunit umuc | E5P20_20665 | Not Available | Negative | 4177916 - 4179184 | 47682.4 |
| translesion error-prone dna polymerase v autoproteolytic subunit | E5P20_20670 | Not Available | Negative | 4179184 - 4179603 | 15064.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





