Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | E5P20_20515 | Not Available | Positive | 4145153 - 4145264 | 4273.23 |
| hypothetical protein | E5P20_20520 | Not Available | Negative | 4145349 - 4145552 | 7888.61 |
| class b acid phosphatase | E5P20_20525 | Not Available | Positive | 4145954 - 4146667 | 26056.9 |
| mmcq/yjbr family dna-binding protein | E5P20_20535 | Not Available | Positive | 4147198 - 4147554 | 13520.2 |
| excinuclease abc subunit uvra | E5P20_20540 | Not Available | Negative | 4147589 - 4150411 | 103874.0 |
| single-stranded dna-binding protein ssb1 | E5P20_20545 | Not Available | Positive | 4150665 - 4151201 | 18976.1 |
| hypothetical protein | E5P20_20550 | Not Available | Negative | 4151300 - 4151581 | 10304.0 |
| superoxide response transcriptional regulator soxs | E5P20_20560 | Not Available | Negative | 4153600 - 4153923 | 12911.6 |
| redox-sensitive transcriptional activator soxr | E5P20_20565 | Not Available | Positive | 4154009 - 4154473 | 17150.7 |
| ncs2 family permease | E5P20_20570 | Not Available | Positive | 4155019 - 4156368 | 45744.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





