Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf333 domain-containing protein | E5P20_20255 | Not Available | Positive | 4092849 - 4093115 | 8696.44 |
| heat shock protein hslj | E5P20_20260 | Not Available | Negative | 4093112 - 4093534 | 15166.5 |
| d-lactate dehydrogenase | E5P20_20265 | Not Available | Negative | 4093645 - 4094634 | 36536.9 |
| ydbh family protein | E5P20_20270 | Not Available | Positive | 4094842 - 4097481 | 96842.3 |
| ynbe family lipoprotein | E5P20_20275 | Not Available | Positive | 4097478 - 4097663 | 6840.53 |
| duf1318 domain-containing protein | E5P20_20280 | Not Available | Positive | 4097671 - 4097997 | 11878.5 |
| transcriptional regulator fear | E5P20_20285 | Not Available | Negative | 4098169 - 4099074 | 34608.3 |
| nad-dependent phenylacetaldehyde dehydrogenase | E5P20_20290 | Not Available | Positive | 4099310 - 4100809 | 53801.3 |
| phenylacetic acid degradation bifunctional protein paaz | E5P20_20300 | Not Available | Negative | 4103387 - 4105432 | 73006.8 |
| 1,2-phenylacetyl-coa epoxidase subunit a | E5P20_20305 | Not Available | Positive | 4105717 - 4106646 | 35501.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





