Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | E5P20_19960 | Not Available | Negative | 4038034 - 4039098 | 39250.4 |
| nad(+) diphosphatase | E5P20_19965 | Not Available | Negative | 4039138 - 4039911 | 29690.6 |
| sigma d regulator | E5P20_19970 | Not Available | Positive | 4040006 - 4040482 | 18243.9 |
| phosphomethylpyrimidine synthase thic | E5P20_19975 | Not Available | Positive | 4040716 - 4042611 | 70852.4 |
| thiamine phosphate synthase | E5P20_19980 | Not Available | Positive | 4042611 - 4043246 | 23016.6 |
| thiazole biosynthesis adenylyltransferase thif | E5P20_19985 | Not Available | Positive | 4043239 - 4043994 | 26971.4 |
| sulfur carrier protein this | E5P20_19990 | Not Available | Positive | 4043978 - 4044178 | 7367.83 |
| thiazole synthase | E5P20_19995 | Not Available | Positive | 4044180 - 4044950 | 26862.7 |
| 2-iminoacetate synthase thih | E5P20_20000 | Not Available | Positive | 4044947 - 4046080 | 43400.6 |
| heat-shock protein c | E5P20_20005 | Not Available | Negative | 4046490 - 4047029 | 21132.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





