Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator metr | E5P20_19810 | Not Available | Negative | 4005346 - 4006299 | 35645.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | E5P20_19815 | Not Available | Positive | 4006536 - 4008797 | 84678.1 |
| dienelactone hydrolase family protein | E5P20_19820 | Not Available | Negative | 4008837 - 4009652 | 29396.8 |
| uridine phosphorylase | E5P20_19825 | Not Available | Positive | 4009914 - 4010675 | 27151.7 |
| dna recombination protein rmuc | E5P20_19830 | Not Available | Positive | 4010816 - 4012243 | 54767.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | E5P20_19835 | Not Available | Positive | 4012338 - 4013093 | 28074.8 |
| ubiquinone biosynthesis protein ubij | E5P20_19840 | Not Available | Positive | 4013107 - 4013712 | 22153.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | E5P20_19845 | Not Available | Positive | 4013709 - 4015349 | 63206.4 |
| sec-independent protein translocase subunit tata | E5P20_19850 | Not Available | Positive | 4015428 - 4015697 | 9620.49 |
| sec-independent protein translocase subunit tatb | E5P20_19855 | Not Available | Positive | 4015701 - 4016216 | 18421.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





