Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | E5P20_19535 | Not Available | Negative | 3964373 - 3964972 | 22293.6 |
| imidazole glycerol phosphate synthase subunit hisf | E5P20_19540 | Not Available | Negative | 3964966 - 3965742 | 28367.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | E5P20_19545 | Not Available | Negative | 3965724 - 3966461 | 26167.3 |
| imidazole glycerol phosphate synthase subunit hish | E5P20_19550 | Not Available | Negative | 3966461 - 3967051 | 21565.0 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | E5P20_19555 | Not Available | Negative | 3967051 - 3968118 | 40174.1 |
| histidinol-phosphate transaminase | E5P20_19560 | Not Available | Negative | 3968115 - 3969185 | 39230.1 |
| histidinol dehydrogenase | E5P20_19565 | Not Available | Negative | 3969182 - 3970486 | 46039.8 |
| atp phosphoribosyltransferase | E5P20_19570 | Not Available | Negative | 3970492 - 3971391 | 33368.8 |
| his operon leader peptide | E5P20_19575 | Not Available | Negative | 3971537 - 3971587 | 2081.43 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | E5P20_19580 | Not Available | Positive | 3971870 - 3972121 | 9308.13 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





