Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P20_19230 | Not Available | Positive | 3906582 - 3907403 | 31450.2 |
| dam family site-specific dna-(adenine-n6)-methyltransferase | E5P20_19235 | Not Available | Negative | 3907418 - 3908242 | 31508.7 |
| dna-binding protein | E5P20_19240 | Not Available | Positive | 3908602 - 3909759 | 42524.0 |
| duf4942 domain-containing protein | E5P20_19245 | Not Available | Positive | 3909945 - 3911699 | 65874.7 |
| hypothetical protein | E5P20_19250 | Not Available | Positive | 3911714 - 3911890 | 6581.43 |
| duf4165 domain-containing protein | E5P20_19255 | Not Available | Positive | 3912336 - 3914792 | 89564.2 |
| hypothetical protein | E5P20_19260 | Not Available | Positive | 3915243 - 3915446 | 7422.75 |
| hypothetical protein | E5P20_19265 | Not Available | Positive | 3915461 - 3915958 | 18643.1 |
| repb family plasmid replication initiator protein | E5P20_19270 | Not Available | Negative | 3916544 - 3917425 | 33335.3 |
| hypothetical protein | E5P20_19275 | Not Available | Negative | 3917817 - 3918413 | 21603.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





