Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trhk | E5P20_19180 | Not Available | Negative | 3898783 - 3900015 | 44416.4 |
| pilus assembly protein | E5P20_19185 | Not Available | Negative | 3900018 - 3900815 | 29764.9 |
| plasmid transfer protein | E5P20_19190 | Not Available | Negative | 3900815 - 3901165 | 13658.8 |
| pili assembly chaperone | E5P20_19195 | Not Available | Negative | 3901184 - 3901537 | 12367.4 |
| hypothetical protein | E5P20_19200 | Not Available | Positive | 3901868 - 3902047 | 6786.36 |
| hypothetical protein | E5P20_19205 | Not Available | Positive | 3902044 - 3902637 | 22717.3 |
| repb family plasmid replication initiator protein | E5P20_19210 | Not Available | Negative | 3902891 - 3903766 | 33191.1 |
| hypothetical protein | E5P20_19215 | Not Available | Positive | 3904301 - 3905377 | 40094.6 |
| hypothetical protein | E5P20_19220 | Not Available | Positive | 3905395 - 3905595 | 7707.19 |
| hypothetical protein | E5P20_19225 | Not Available | Positive | 3905592 - 3906299 | 26335.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





