Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shet2/espl2 family type iii secretion system effector toxin | E5P20_19010 | Not Available | Negative | 3858488 - 3860674 | 82602.9 |
| glyoxylate bypass operon transcriptional repressor iclr | E5P20_19015 | Not Available | Negative | 3860991 - 3861815 | 29741.1 |
| methionine synthase | E5P20_19020 | Not Available | Positive | 3862015 - 3865698 | 136005.0 |
| na/pi cotransporter family protein | E5P20_19025 | Not Available | Positive | 3865918 - 3867549 | 59470.7 |
| dipeptidase pepe | E5P20_19030 | Not Available | Negative | 3867640 - 3868329 | 24571.7 |
| 23s rrna pseudouridine(2604) synthase rluf | E5P20_19035 | Not Available | Positive | 3868541 - 3869413 | 32478.5 |
| duf3811 domain-containing protein | E5P20_19040 | Not Available | Negative | 3869546 - 3869818 | 10532.7 |
| lysine-sensitive aspartokinase 3 | E5P20_19045 | Not Available | Negative | 3870071 - 3871420 | 48534.6 |
| glucose-6-phosphate isomerase | E5P20_19055 | Not Available | Positive | 3871945 - 3873594 | 61533.1 |
| hypothetical protein | E5P20_19060 | Not Available | Positive | 3874093 - 3874335 | 7386.46 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





