Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clamp-binding protein crfc | E5P20_18540 | Not Available | Positive | 3754644 - 3756872 | 84320.7 |
| hypothetical protein | E5P20_18545 | Not Available | Positive | 3756869 - 3757747 | 32911.7 |
| proline/glycine betaine transporter prop | E5P20_18550 | Not Available | Positive | 3758011 - 3759513 | 54862.2 |
| lpxt activity modulator pmrr | E5P20_18555 | Not Available | Positive | 3759625 - 3759714 | 3465.23 |
| two-component system sensor histidine kinase pmrb | E5P20_18560 | Not Available | Negative | 3759690 - 3760781 | 41050.8 |
| two-component system response regulator basr | E5P20_18565 | Not Available | Negative | 3760791 - 3761459 | 25002.3 |
| phosphoethanolamine transferase epta | E5P20_18570 | Not Available | Negative | 3761456 - 3763099 | 61670.6 |
| arginine/agmatine antiporter | E5P20_18575 | Not Available | Negative | 3763203 - 3764540 | 46845.3 |
| arac family transcriptional regulator | E5P20_18580 | Not Available | Negative | 3764677 - 3765438 | 29008.3 |
| arginine decarboxylase | E5P20_18585 | Not Available | Negative | 3765763 - 3768030 | 84460.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





