Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | E5P20_18330 | Not Available | Positive | 3717738 - 3719690 | 70694.1 |
| type ii secretion system protein gspe | E5P20_18335 | Not Available | Positive | 3719700 - 3721181 | 54613.9 |
| type ii secretion system protein gspf | E5P20_18340 | Not Available | Positive | 3721178 - 3722374 | 44341.9 |
| type ii secretion system protein gspg | E5P20_18345 | Not Available | Positive | 3722384 - 3722821 | 15906.1 |
| type ii secretion system protein gsph | E5P20_18350 | Not Available | Positive | 3722829 - 3723338 | 18566.1 |
| type ii secretion system protein gspi | E5P20_18355 | Not Available | Positive | 3723335 - 3723712 | 13902.2 |
| type ii secretion system protein gspj | E5P20_18360 | Not Available | Positive | 3723705 - 3724292 | 22232.5 |
| general secretion pathway protein gspk | E5P20_18365 | Not Available | Positive | 3724285 - 3725268 | 37648.7 |
| type ii secretion system protein gspl | E5P20_18370 | Not Available | Positive | 3725283 - 3726446 | 44542.3 |
| type ii secretion system protein m | E5P20_18375 | Not Available | Positive | 3726443 - 3726904 | 17234.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





