Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase | E5P20_18080 | Not Available | Positive | 3686261 - 3687436 | 42852.3 |
| duf945 domain-containing protein | E5P20_18085 | Not Available | Positive | 3687537 - 3689045 | 54692.1 |
| hypothetical protein | E5P20_18090 | Not Available | Negative | 3689271 - 3689975 | 26251.9 |
| is1 family transposase | E5P20_18095 | Not Available | Negative | 3690031 - 3690142 | 4273.23 |
| gamma carbonic anhydrase family protein | E5P20_18100 | Not Available | Positive | 3690597 - 3691151 | 20246.3 |
| duf1488 domain-containing protein | E5P20_18105 | Not Available | Negative | 3691127 - 3691384 | 10007.5 |
| shikimate dehydrogenase | E5P20_18110 | Not Available | Negative | 3691381 - 3692199 | 29415.3 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | E5P20_18115 | Not Available | Negative | 3692204 - 3692776 | 20768.9 |
| hypothetical protein | E5P20_18120 | Not Available | Negative | 3692781 - 3693323 | 19872.0 |
| duf494 domain-containing protein | E5P20_18125 | Not Available | Negative | 3693352 - 3693825 | 18511.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





