Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfc family lipoprotein | E5P20_17930 | Not Available | Negative | 3654432 - 3655142 | 26508.3 |
| duf1161 domain-containing protein | E5P20_17935 | Not Available | Positive | 3655250 - 3655555 | 10477.2 |
| dimethyl sulfoxide reductase subunit a | E5P20_17940 | Not Available | Positive | 3655754 - 3658180 | 89811.1 |
| dimethyl sulfoxide reductase subunit a | E5P20_17945 | Not Available | Positive | 3658241 - 3660664 | 89965.0 |
| dimethylsulfoxide reductase subunit b | E5P20_17950 | Not Available | Positive | 3660675 - 3661292 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | E5P20_17955 | Not Available | Positive | 3661294 - 3662148 | 30525.6 |
| tat proofreading chaperone dmsd | E5P20_17960 | Not Available | Positive | 3662191 - 3662805 | 23345.8 |
| voltage-gated clc-type chloride channel clcb | E5P20_17965 | Not Available | Positive | 3662964 - 3664256 | 45690.0 |
| atp-dependent dethiobiotin synthetase biod | E5P20_17970 | Not Available | Negative | 3664209 - 3664904 | 24982.5 |
| dna-binding transcriptional repressor mlc | E5P20_17975 | Not Available | Negative | 3665029 - 3666249 | 44318.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





