Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf808 domain-containing protein | E5P20_17775 | Not Available | Negative | 3623160 - 3624077 | 32116.7 |
| drug/metabolite exporter yeda | E5P20_17780 | Not Available | Positive | 3624250 - 3625170 | 32196.0 |
| very short patch repair endonuclease | E5P20_17785 | Not Available | Negative | 3625159 - 3625629 | 17947.5 |
| dna cytosine methyltransferase | E5P20_17790 | Not Available | Negative | 3625610 - 3627028 | 53493.8 |
| phosphohydrolase | E5P20_17795 | Not Available | Negative | 3627095 - 3627790 | 25915.7 |
| permease | E5P20_17800 | Not Available | Negative | 3627830 - 3628195 | 13822.9 |
| porin | E5P20_17805 | Not Available | Positive | 3628761 - 3629834 | 39729.6 |
| protein deglycase hcha | E5P20_17815 | Not Available | Positive | 3630427 - 3631278 | 31178.1 |
| heavy metal sensor histidine kinase | E5P20_17820 | Not Available | Negative | 3631386 - 3632744 | 50898.8 |
| dna-binding response regulator hprr | E5P20_17825 | Not Available | Negative | 3632744 - 3633415 | 25010.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





