Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar type iii secretion system pore protein flip | E5P20_17725 | Not Available | Positive | 3616580 - 3617317 | 26930.1 |
| flagellar biosynthesis protein fliq | E5P20_17730 | Not Available | Positive | 3617327 - 3617596 | 9632.54 |
| flagellar type iii secretion system protein flir | E5P20_17735 | Not Available | Positive | 3617604 - 3618389 | 28537.3 |
| transcriptional regulator rcsa | E5P20_17740 | Not Available | Positive | 3618679 - 3619302 | 23522.8 |
| protein dsrb | E5P20_17745 | Not Available | Negative | 3619346 - 3619588 | 9071.8 |
| hypothetical protein | E5P20_17750 | Not Available | Negative | 3619521 - 3619709 | 7014.32 |
| peroxide/acid resistance protein yodd | E5P20_17755 | Not Available | Positive | 3619697 - 3619924 | 8595.66 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | E5P20_17760 | Not Available | Positive | 3620222 - 3621037 | 30366.8 |
| cellulose biosynthesis regulator yedq | E5P20_17765 | Not Available | Negative | 3621034 - 3622728 | 64289.5 |
| duf2158 domain-containing protein | E5P20_17770 | Not Available | Negative | 3622899 - 3623081 | 6678.85 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





