Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | E5P20_17615 | Not Available | Positive | 3602260 - 3602931 | 25098.7 |
| hypothetical protein | E5P20_17620 | Not Available | Negative | 3602971 - 3603142 | 5922.1 |
| transposase | E5P20_17625 | Not Available | Negative | 3603143 - 3603405 | 9711.67 |
| transposase | E5P20_17630 | Not Available | Negative | 3603502 - 3603807 | 11988.4 |
| antitermination protein | E5P20_17645 | Not Available | Negative | 3604875 - 3605003 | 4665.04 |
| arac family transcriptional regulator | E5P20_17650 | Not Available | Negative | 3605218 - 3606015 | 30761.4 |
| raf kinase inhibitor-like protein ybcl | E5P20_17655 | Not Available | Negative | 3606025 - 3606576 | 19403.8 |
| multidrug smr transporter | E5P20_17660 | Not Available | Negative | 3606745 - 3607077 | 11915.0 |
| integrase | E5P20_17665 | Not Available | Positive | 3607177 - 3607491 | 12377.6 |
| flagellar hook-basal body complex protein flie | E5P20_17670 | Not Available | Negative | 3607411 - 3607725 | 11113.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





