Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P20_17355 | Not Available | Negative | 3556703 - 3557026 | 11994.7 |
| hypothetical protein | E5P20_17360 | Not Available | Negative | 3557258 - 3557464 | 7526.78 |
| hypothetical protein | E5P20_17365 | Not Available | Negative | 3557499 - 3557723 | 8199.6 |
| hypothetical protein | E5P20_17370 | Not Available | Positive | 3557780 - 3558337 | 20854.7 |
| dtdp-glucose 4,6-dehydratase | E5P20_17375 | Not Available | Positive | 3559104 - 3560168 | 39329.2 |
| glucose-1-phosphate thymidylyltransferase | E5P20_17380 | Not Available | Positive | 3560183 - 3561052 | 32038.6 |
| dtdp-4-dehydrorhamnose reductase | E5P20_17385 | Not Available | Positive | 3561084 - 3561974 | 32189.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | E5P20_17390 | Not Available | Positive | 3561989 - 3562543 | 20743.5 |
| glycosyltransferase family 2 protein | E5P20_17395 | Not Available | Positive | 3562635 - 3563465 | 32183.7 |
| abc transporter permease | E5P20_17400 | Not Available | Positive | 3563495 - 3564328 | 31321.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





