Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | E5P20_17205 | Not Available | Positive | 3528049 - 3528564 | 19926.8 |
| hypothetical protein | E5P20_17210 | Not Available | Positive | 3528661 - 3529227 | 21552.9 |
| conjugal transfer protein trag | E5P20_17215 | Not Available | Negative | 3529474 - 3533463 | 140947.0 |
| conjugal transfer protein | E5P20_17220 | Not Available | Negative | 3533472 - 3534887 | 50342.4 |
| thioredoxin family protein | E5P20_17225 | Not Available | Negative | 3534877 - 3535923 | 39703.6 |
| hypothetical protein | E5P20_17230 | Not Available | Negative | 3536535 - 3537047 | 19430.2 |
| trhr | E5P20_17235 | Not Available | Negative | 3537050 - 3537850 | 30287.5 |
| plasmid transfer protein | E5P20_17240 | Not Available | Positive | 3538608 - 3539093 | 19185.1 |
| hypothetical protein | E5P20_17245 | Not Available | Positive | 3539090 - 3539812 | 27886.0 |
| helicase | E5P20_17250 | Not Available | Positive | 3539823 - 3542858 | 113055.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





