Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | E5P20_17045 | Not Available | Negative | 3500109 - 3501149 | 38834.4 |
| duf2623 domain-containing protein | E5P20_17055 | Not Available | Positive | 3502309 - 3502596 | 10946.1 |
| hydrogenase 2 small subunit | E5P20_17060 | Not Available | Positive | 3502785 - 3503903 | 39654.3 |
| hydrogenase 2 operon protein hyba | E5P20_17065 | Not Available | Positive | 3503906 - 3504892 | 36005.0 |
| ni/fe-hydrogenase cytochrome b subunit | E5P20_17070 | Not Available | Positive | 3504882 - 3506060 | 43604.6 |
| hydrogenase 2 large subunit | E5P20_17075 | Not Available | Positive | 3506057 - 3507760 | 62494.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | E5P20_17080 | Not Available | Positive | 3507760 - 3508254 | 17751.8 |
| hydrogenase-2 assembly chaperone | E5P20_17085 | Not Available | Positive | 3508247 - 3508735 | 17964.7 |
| hydrogenase maturation nickel metallochaperone hypa | E5P20_17090 | Not Available | Positive | 3508728 - 3509069 | 12698.1 |
| hydrogenase maturation factor hybg | E5P20_17095 | Not Available | Positive | 3509082 - 3509330 | 8808.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





