Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator qseb | E5P20_16940 | Not Available | Negative | 3478558 - 3479217 | 24689.2 |
| ob fold stress tolerance protein ygiw | E5P20_16945 | Not Available | Positive | 3479369 - 3479761 | 14011.5 |
| transcriptional regulator | E5P20_16950 | Not Available | Positive | 3479814 - 3480296 | 17828.2 |
| type ii toxin-antitoxin system toxin mqsr | E5P20_16955 | Not Available | Positive | 3480501 - 3480797 | 11244.7 |
| type ii toxin-antitoxin system antitoxin mqsa | E5P20_16960 | Not Available | Positive | 3480799 - 3481194 | 14703.9 |
| abc transporter substrate-binding protein | E5P20_16965 | Not Available | Positive | 3481327 - 3482934 | 60746.2 |
| dna topoisomerase 4 subunit a | E5P20_16970 | Not Available | Positive | 3483072 - 3485330 | 83836.3 |
| 1-acylglycerol-3-phosphate o-acyltransferase | E5P20_16975 | Not Available | Positive | 3485564 - 3486301 | 27454.8 |
| cell division protein ftsp | E5P20_16980 | Not Available | Positive | 3486376 - 3487788 | 51873.2 |
| ygiq family radical sam protein | E5P20_16985 | Not Available | Positive | 3487899 - 3490118 | 83482.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





