Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P20_16635 | Not Available | Negative | 3412970 - 3413038 | 2256.66 |
| udp-glucose 6-dehydrogenase | E5P20_16640 | Not Available | Negative | 3413270 - 3414436 | 43500.0 |
| nadp-dependent phosphogluconate dehydrogenase | E5P20_16645 | Not Available | Negative | 3414668 - 3416074 | 51280.8 |
| glycosyltransferase | E5P20_16655 | Not Available | Negative | 3417446 - 3418327 | 34384.8 |
| rhamnosyltransferase | E5P20_16660 | Not Available | Negative | 3418350 - 3419243 | 34512.6 |
| hypothetical protein | E5P20_16665 | Not Available | Negative | 3419261 - 3420418 | 45180.1 |
| o100 family o-antigen flippase | E5P20_16670 | Not Available | Negative | 3420408 - 3421649 | 45823.7 |
| glycerol-3-phosphate cytidylyltransferase | E5P20_16675 | Not Available | Negative | 3421664 - 3422056 | 15095.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | E5P20_16680 | Not Available | Negative | 3422059 - 3422616 | 21129.9 |
| glucose-1-phosphate thymidylyltransferase rfba | E5P20_16685 | Not Available | Negative | 3422618 - 3423496 | 32557.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





