Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P20_16580 | Not Available | Positive | 3406803 - 3407060 | 9312.98 |
| hypothetical protein | E5P20_16585 | Not Available | Positive | 3407134 - 3407670 | 19882.8 |
| hypothetical protein | E5P20_16590 | Not Available | Positive | 3407687 - 3408142 | 18159.6 |
| hypothetical protein | E5P20_16600 | Not Available | Positive | 3408356 - 3408634 | 10493.8 |
| dna replication terminus site-binding protein | E5P20_16605 | Not Available | Positive | 3408723 - 3409682 | 36231.9 |
| hypothetical protein | E5P20_16610 | Not Available | Positive | 3409693 - 3410601 | 34737.0 |
| hypothetical protein | E5P20_16615 | Not Available | Positive | 3410537 - 3410881 | 13054.8 |
| recombinase | E5P20_16620 | Not Available | Negative | 3410906 - 3412087 | 44896.9 |
| hypothetical protein | E5P20_16625 | Not Available | Positive | 3412302 - 3412514 | 8120.89 |
| is1 family transposase | E5P20_16630 | Not Available | Positive | 3412821 - 3412969 | 5504.47 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





