Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1656 domain-containing protein | E5P20_15560 | Not Available | Positive | 3182766 - 3182969 | 7847.01 |
| p-hydroxybenzoic acid efflux pump subunit aaea | E5P20_15565 | Not Available | Positive | 3182977 - 3183909 | 34762.5 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | E5P20_15570 | Not Available | Positive | 3183915 - 3185882 | 73614.9 |
| hypothetical protein | E5P20_15575 | Not Available | Positive | 3185974 - 3186246 | 10796.7 |
| peroxide/acid stress response protein yhcn | E5P20_15580 | Not Available | Negative | 3186302 - 3186565 | 9196.89 |
| transcriptional regulator argr | E5P20_15585 | Not Available | Negative | 3186930 - 3187400 | 16995.5 |
| malate dehydrogenase | E5P20_15590 | Not Available | Positive | 3187835 - 3188773 | 32339.2 |
| serine endoprotease degs | E5P20_15595 | Not Available | Negative | 3188836 - 3189903 | 37583.4 |
| serine endoprotease degq | E5P20_15600 | Not Available | Negative | 3189993 - 3191360 | 47207.9 |
| duf1043 family protein | E5P20_15605 | Not Available | Negative | 3191514 - 3191912 | 14961.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





