Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit psi | E5P20_13995 | Not Available | Negative | 2901409 - 2901822 | 15208.3 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | E5P20_14000 | Not Available | Positive | 2901925 - 2902956 | 37596.7 |
| Trna-leu | Not Available | Not Available | Positive | 2903257 - 2903343 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2903372 - 2903458 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2903492 - 2903578 | Not Available |
| duf1435 domain-containing protein | E5P20_14020 | Not Available | Negative | 2903617 - 2903853 | 8673.37 |
| hydroxamate siderophore iron reductase fhuf | E5P20_14025 | Not Available | Positive | 2903994 - 2904782 | 30094.3 |
| dna-binding transcriptional activator bglj | E5P20_14030 | Not Available | Negative | 2904820 - 2905497 | 25593.1 |
| response regulator transcription factor | E5P20_14035 | Not Available | Negative | 2905455 - 2906180 | 27033.6 |
| threonine/serine exporter thre family protein | E5P20_14040 | Not Available | Positive | 2906799 - 2907569 | 27977.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





