Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator ttdr | E5P20_13545 | Not Available | Negative | 2805428 - 2806360 | 35315.7 |
| l(+)-tartrate dehydratase subunit alpha | E5P20_13550 | Not Available | Positive | 2806567 - 2807478 | 32735.5 |
| l(+)-tartrate dehydratase subunit beta | E5P20_13555 | Not Available | Positive | 2807475 - 2808080 | 22680.8 |
| l-tartrate/succinate antiporter | E5P20_13560 | Not Available | Positive | 2808128 - 2809591 | 52909.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | E5P20_13565 | Not Available | Negative | 2809634 - 2810647 | 36010.5 |
| 30s ribosomal protein s21 | E5P20_13570 | Not Available | Positive | 2810885 - 2811100 | 8500.42 |
| dna primase | E5P20_13575 | Not Available | Positive | 2811211 - 2812956 | 65568.5 |
| rna polymerase sigma factor rpod | E5P20_13580 | Not Available | Positive | 2813151 - 2814992 | 70241.3 |
| g/u mismatch-specific dna glycosylase | E5P20_13585 | Not Available | Negative | 2815071 - 2815577 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 2815702 - 2815777 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





