Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | E5P20_13390 | Not Available | Positive | 2774574 - 2775518 | 34198.0 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | E5P20_13395 | Not Available | Positive | 2775536 - 2776402 | 31939.3 |
| 2-keto-4-pentenoate hydratase | E5P20_13400 | Not Available | Positive | 2776412 - 2777221 | 28891.6 |
| acetaldehyde dehydrogenase (acetylating) | E5P20_13405 | Not Available | Positive | 2777218 - 2778168 | 33444.5 |
| 4-hydroxy-2-oxovalerate aldolase | E5P20_13410 | Not Available | Positive | 2778165 - 2779178 | 36481.6 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | E5P20_13415 | Not Available | Positive | 2779657 - 2780868 | 41543.4 |
| duf2058 domain-containing protein | E5P20_13420 | Not Available | Positive | 2780970 - 2781509 | 19923.8 |
| s-formylglutathione hydrolase frmb | E5P20_13425 | Not Available | Negative | 2781735 - 2782568 | 31366.0 |
| s-(hydroxymethyl)glutathione dehydrogenase | E5P20_13430 | Not Available | Negative | 2782661 - 2783770 | 39335.2 |
| formaldehyde-responsive transcriptional repressor frmr | E5P20_13435 | Not Available | Negative | 2783805 - 2784080 | 10318.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





