Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2877 domain-containing protein | E5P20_13245 | Not Available | Positive | 2740222 - 2741085 | 32267.6 |
| acyl-coa synthetase fdra | E5P20_13250 | Not Available | Positive | 2741075 - 2742622 | 55584.1 |
| hypothetical protein | E5P20_13255 | Not Available | Positive | 2742622 - 2742942 | 11380.8 |
| duf1116 domain-containing protein | E5P20_13260 | Not Available | Positive | 2742949 - 2744040 | 38570.7 |
| hypothetical protein | E5P20_13265 | Not Available | Positive | 2744090 - 2744386 | 9791.94 |
| carbamate kinase family protein | E5P20_13270 | Not Available | Positive | 2744462 - 2745412 | 33932.9 |
| deaminase | E5P20_13275 | Not Available | Positive | 2745422 - 2746804 | 50551.7 |
| nadph-dependent aldehyde reductase yahk | E5P20_13280 | Not Available | Positive | 2747181 - 2748230 | 37938.5 |
| hypothetical protein | E5P20_13285 | Not Available | Positive | 2748473 - 2749288 | 31794.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 2749631 - 2749711 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





