Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin hoka | E5P20_11230 | Not Available | Positive | 2339710 - 2339862 | 5912.47 |
| rna chaperone/antiterminator cspa | E5P20_11235 | Not Available | Negative | 2340050 - 2340262 | 7403.66 |
| hth-type transcriptional regulator | E5P20_11240 | Not Available | Negative | 2340543 - 2340833 | 11033.5 |
| duf3053 domain-containing protein | E5P20_11245 | Not Available | Positive | 2341267 - 2341977 | 25664.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | E5P20_11250 | Not Available | Negative | 2342027 - 2343001 | 35409.5 |
| ompa family lipoprotein | E5P20_11255 | Not Available | Negative | 2343105 - 2343764 | 22228.6 |
| biotin sulfoxide reductase | E5P20_11260 | Not Available | Positive | 2343917 - 2346250 | 85855.3 |
| n-acetyltransferase | E5P20_11265 | Not Available | Negative | 2346219 - 2346659 | 17104.8 |
| dna-3-methyladenine glycosylase 1 | E5P20_11270 | Not Available | Negative | 2346656 - 2347219 | 21101.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | E5P20_11275 | Not Available | Positive | 2347377 - 2348075 | 25952.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





