Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v subunit beta | E5P20_10820 | Not Available | Positive | 2248261 - 2251803 | 133981.0 |
| recbcd enzyme subunit recd | E5P20_10825 | Not Available | Positive | 2251803 - 2253629 | 66906.3 |
| amino-acid n-acetyltransferase | E5P20_10830 | Not Available | Negative | 2253691 - 2255022 | 49198.1 |
| n-acetylmuramoyl-l-alanine amidase | E5P20_10835 | Not Available | Positive | 2255254 - 2256507 | 45637.1 |
| Trna-met | Not Available | Not Available | Positive | 2256581 - 2256657 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2256691 - 2256767 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2256801 - 2256877 | Not Available |
| murein transglycosylase a | E5P20_10855 | Not Available | Positive | 2257086 - 2258183 | 40412.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | E5P20_10860 | Not Available | Positive | 2258422 - 2259228 | 28563.6 |
| cysteine desulfurase sulfur acceptor subunit csde | E5P20_10865 | Not Available | Negative | 2259279 - 2259722 | 15941.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





