Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1209259 bp
Thymine Count
1207586 bp
Guanine Count
1241547 bp
Cytosine Count
1239791 bp
Genome Length
4898183 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
255 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Late promoter-activating protein lpa | E5P20_23035 | Not Available | Negative | 4604857 - 4605015 | 6292.61 |
| Conserved protein of unknown function pdcb | E5P20_23040 | Not Available | Negative | 4605104 - 4606147 | 39705.8 |
| Pdca | E5P20_23045 | Not Available | Negative | 4606175 - 4606354 | 6776.63 |
| Toxin protein | E5P20_23050 | Not Available | Negative | 4606359 - 4606739 | 13559.0 |
| Prevention of host death by doc toxicity | E5P20_23055 | Not Available | Negative | 4606739 - 4606960 | 8134.51 |
| Transposase is1 | E5P20_23060 | Not Available | Positive | 4607225 - 4607293 | 2256.66 |
| is1 family transposase | E5P20_00005 | Not Available | Positive | 1 - 112 | 4273.23 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3 - 118 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5 - 120 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 119 - 234 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





