Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | E5P19_09885 | Not Available | Negative | 2083903 - 2084916 | 37902.6 |
| lysr family transcriptional regulator | E5P19_09890 | Not Available | Negative | 2084965 - 2085864 | 33275.5 |
| response regulator transcription factor | E5P19_09895 | Not Available | Positive | 2086384 - 2086986 | 22605.6 |
| alpha,alpha-trehalase tref | E5P19_09900 | Not Available | Negative | 2087037 - 2088686 | 63718.1 |
| cytochrome c peroxidase | E5P19_09905 | Not Available | Positive | 2089091 - 2090488 | 51543.3 |
| glutamate decarboxylase | E5P19_09910 | Not Available | Positive | 2090699 - 2091119 | 15866.8 |
| asparagine--trna ligase | E5P19_09915 | Not Available | Negative | 2091211 - 2092611 | 52573.2 |
| nicotinate phosphoribosyltransferase | E5P19_09920 | Not Available | Negative | 2092780 - 2093982 | 45957.8 |
| aminopeptidase n | E5P19_09925 | Not Available | Positive | 2094248 - 2096860 | 98956.2 |
| aliphatic sulfonates abc transporter atp-binding protein | E5P19_09930 | Not Available | Negative | 2097067 - 2097834 | 27797.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





