Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | E5P19_09310 | Not Available | Positive | 1952367 - 1954013 | 61529.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | E5P19_09315 | Not Available | Positive | 1954119 - 1955483 | 49247.8 |
| tryptophanase leader peptide | E5P19_09320 | Not Available | Positive | 1955726 - 1955800 | 2894.56 |
| tryptophanase | E5P19_09325 | Not Available | Positive | 1956021 - 1957436 | 52776.4 |
| low affinity tryptophan permease tnab | E5P19_09330 | Not Available | Positive | 1957527 - 1958774 | 45227.3 |
| multidrug efflux mfs transporter mdtl | E5P19_09335 | Not Available | Positive | 1958906 - 1960081 | 41508.2 |
| hth-type transcriptional regulator yidz | E5P19_09340 | Not Available | Positive | 1960056 - 1961015 | 36903.9 |
| hypothetical protein | E5P19_09345 | Not Available | Positive | 1961172 - 1961921 | 27664.3 |
| nad(p)h-dependent chromate oxidoreductase yief | E5P19_09350 | Not Available | Positive | 1961943 - 1962509 | 20376.9 |
| ncs2 family permease | E5P19_09355 | Not Available | Negative | 1962563 - 1963900 | 46829.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





