Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | E5P19_08955 | Not Available | Positive | 1879075 - 1880295 | 43440.7 |
| dutp diphosphatase | E5P19_08960 | Not Available | Positive | 1880276 - 1880731 | 16157.4 |
| nucleoid occlusion factor slma | E5P19_08965 | Not Available | Positive | 1880838 - 1881434 | 22837.7 |
| orotate phosphoribosyltransferase | E5P19_08970 | Not Available | Negative | 1881471 - 1882112 | 23568.3 |
| ribonuclease ph | E5P19_08975 | Not Available | Negative | 1882178 - 1882894 | 25313.4 |
| yicc family protein | E5P19_08980 | Not Available | Positive | 1883021 - 1883884 | 33160.9 |
| dna damage-inducible protein d | E5P19_08985 | Not Available | Positive | 1884105 - 1884929 | 31052.6 |
| trimeric intracellular cation channel family protein | E5P19_08990 | Not Available | Positive | 1885221 - 1885838 | 22049.8 |
| nad-dependent dna ligase ligb | E5P19_08995 | Not Available | Negative | 1885835 - 1887517 | 63310.0 |
| guanylate kinase | E5P19_09000 | Not Available | Positive | 1887775 - 1888398 | 23594.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





