Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component-system connector protein ymga | E5P19_08330 | Not Available | Positive | 1760363 - 1760635 | 10345.5 |
| biofilm/acid-resistance regulator arir | E5P19_08335 | Not Available | Positive | 1760664 - 1760930 | 9694.59 |
| hypothetical protein | E5P19_08340 | Not Available | Positive | 1761043 - 1761291 | 9701.79 |
| cyclic diguanylate phosphodiesterase | E5P19_08345 | Not Available | Positive | 1761623 - 1763146 | 56860.2 |
| hypothetical protein | E5P19_08350 | Not Available | Positive | 1763278 - 1763496 | 8228.32 |
| hypothetical protein | E5P19_08355 | Not Available | Positive | 1763896 - 1764105 | 7478.03 |
| autotransporter outer membrane beta-barrel domain-containing protein | E5P19_08360 | Not Available | Positive | 1764222 - 1766543 | 82470.5 |
| ymgd family protein | E5P19_08365 | Not Available | Negative | 1766600 - 1766929 | 11852.5 |
| glycine zipper family protein | E5P19_08370 | Not Available | Negative | 1766939 - 1767283 | 10807.6 |
| hypothetical protein | E5P19_08375 | Not Available | Negative | 1767285 - 1767458 | 6518.21 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





