Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase adapter rapz | E5P19_07980 | Not Available | Negative | 1696287 - 1697141 | 32494.2 |
| pts iia-like nitrogen regulatory protein ptsn | E5P19_07985 | Not Available | Negative | 1697187 - 1697678 | 17960.6 |
| ribosome hibernation promoting factor | E5P19_07990 | Not Available | Negative | 1697796 - 1698083 | 10750.9 |
| rna polymerase factor sigma-54 | E5P19_07995 | Not Available | Negative | 1698106 - 1699539 | 54054.9 |
| lipopolysaccharide abc transporter atp-binding protein | E5P19_08000 | Not Available | Negative | 1699587 - 1700312 | 26802.3 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | E5P19_08005 | Not Available | Negative | 1700319 - 1700876 | 20128.1 |
| lps export abc transporter periplasmic protein lptc | E5P19_08010 | Not Available | Negative | 1700845 - 1701420 | 21703.8 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | E5P19_08015 | Not Available | Negative | 1701417 - 1701983 | 20016.3 |
| arabinose-5-phosphate isomerase kdsd | E5P19_08020 | Not Available | Negative | 1702004 - 1702990 | 35198.3 |
| calcium/sodium antiporter | E5P19_08025 | Not Available | Negative | 1703004 - 1703981 | 34742.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





