Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna/rna nuclease sfsa | E5P19_07315 | Not Available | Positive | 1550558 - 1551262 | 26230.2 |
| rna polymerase-binding transcription factor dksa | E5P19_07320 | Not Available | Positive | 1551440 - 1551895 | 17528.7 |
| trna glutamyl-q(34) synthetase gluqrs | E5P19_07325 | Not Available | Positive | 1551932 - 1552858 | 34864.5 |
| polynucleotide adenylyltransferase pcnb | E5P19_07330 | Not Available | Positive | 1552897 - 1554315 | 54645.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | E5P19_07335 | Not Available | Positive | 1554312 - 1554791 | 17951.6 |
| fimbrial protein | E5P19_07340 | Not Available | Positive | 1555161 - 1555745 | 20118.7 |
| fimbrial chaperone | E5P19_07345 | Not Available | Positive | 1555850 - 1556590 | 26958.2 |
| outer membrane usher protein | E5P19_07350 | Not Available | Positive | 1556625 - 1559225 | 95650.8 |
| fimbrial protein | E5P19_07355 | Not Available | Positive | 1559242 - 1559811 | 20292.1 |
| fimbrial-like protein yadl | E5P19_07360 | Not Available | Positive | 1559826 - 1560428 | 20898.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





