Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter substrate-binding protein metq | E5P19_07060 | Not Available | Positive | 1491999 - 1492814 | 29419.2 |
| rcs stress response system protein rcsf | E5P19_07065 | Not Available | Positive | 1492932 - 1493336 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | E5P19_07070 | Not Available | Positive | 1493333 - 1494040 | 26381.8 |
| proline--trna ligase | E5P19_07075 | Not Available | Positive | 1494151 - 1495869 | 63626.2 |
| envelope stress response activation lipoprotein nlpe | E5P19_07085 | Not Available | Negative | 1496901 - 1497611 | 25885.8 |
| aminoacyl-trna hydrolase | E5P19_07090 | Not Available | Negative | 1497625 - 1498047 | 15577.9 |
| yaeq family protein | E5P19_07095 | Not Available | Negative | 1498044 - 1498589 | 20877.7 |
| yaep family protein | E5P19_07100 | Not Available | Positive | 1498755 - 1498955 | 7214.59 |
| rho-binding antiterminator | E5P19_07105 | Not Available | Positive | 1498942 - 1499202 | 9698.45 |
| trna lysidine(34) synthetase tils | E5P19_07110 | Not Available | Negative | 1499251 - 1500549 | 48006.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





