Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsc family reductase | E5P19_06840 | Not Available | Positive | 1449634 - 1449990 | 13515.2 |
| succinyl-diaminopimelate desuccinylase | E5P19_06845 | Not Available | Positive | 1449994 - 1451121 | 41287.4 |
| ypfn family protein | E5P19_06850 | Not Available | Positive | 1451149 - 1451349 | 8071.78 |
| esterase | E5P19_06855 | Not Available | Negative | 1451459 - 1452157 | 24801.4 |
| trna(met) cytidine acetyltransferase | E5P19_06860 | Not Available | Negative | 1452231 - 1454246 | 74737.5 |
| neutral zinc metallopeptidase | E5P19_06865 | Not Available | Negative | 1454261 - 1455124 | 31489.1 |
| trna(fmet)-specific endonuclease vapc | E5P19_06870 | Not Available | Negative | 1455271 - 1455669 | 14863.1 |
| antitoxin | E5P19_06875 | Not Available | Negative | 1455669 - 1455896 | 8499.05 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | E5P19_06880 | Not Available | Negative | 1456050 - 1456763 | 26996.5 |
| outer membrane protein assembly factor bamc | E5P19_06885 | Not Available | Negative | 1456976 - 1458010 | 36844.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





